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When I read in a dense matrix (mesh points) in text file format into the
Matlab module, I get the following error message:

scirun> Thread "Matlab"(pid 31308) caught signal SIGSEGV at address (nil) 
(segmentation violation)
Backtrace:
/usr/local/SCIRun.1.24.2/SCIRun/build/lib/libCore_Thread.so(_ZN6SCIRun6Thr
ead9niceAbortEv+0x18) [0xb5c940]
/usr/local/SCIRun.1.24.2/SCIRun/build/lib/libCore_Thread.so [0xb669dd]
[0x5eb420]
/usr/local/SCIRun.1.24.2/SCIRun/build/lib/libCore_Datatypes.so(_ZN6SCIRun1
1DenseMatrix9transposeEv+0x38) [0x1342834]
/usr/local/SCIRun.1.24.2/SCIRun/build/lib/libPackages_MatlabInterface_Core
_Datatypes.so(_ZN8MatlabIO15matlabconverter19sciMatrixTOmlMatrixERN6SCIRun
13LockingHandleINS1_6MatrixEEERNS_11matlabarrayE+0x5b) [0x3a9c69b]
/usr/local/SCIRun.1.24.2/SCIRun/build/lib/libPackages_MatlabInterface_Core
_Datatypes.so(_ZN8MatlabIO15matlabconverter18sciMatrixTOmlArrayERN6SCIRun1
3LockingHandleINS1_6MatrixEEERNS_11matlabarrayEPNS1_16ProgressReporterE+0x
c9) [0x3a9f4e5]
/usr/local/SCIRun.1.24.2/SCIRun/build/lib/libPackages_MatlabInterface_Data
flow_Modules_DataIO.so(_ZN8MatlabIO6Matlab19save_input_matricesEv+0x6a2)
[0x36bd3ee]
/usr/local/SCIRun.1.24.2/SCIRun/build/lib/libPackages_MatlabInterface_Data
flow_Modules_DataIO.so(_ZN8MatlabIO6Matlab7executeEv+0xb5) [0x36c4349]
/usr/local/SCIRun.1.24.2/SCIRun/build/lib/libDataflow_Network.so(_ZN6SCIRu
n6Module10do_executeEv+0xc7) [0x259fa3]
/usr/local/SCIRun.1.24.2/SCIRun/build/lib/libDataflow_Network.so(_ZN6SCIRu
n12ModuleHelper3runEv+0xd8) [0x24eee8]
/usr/local/SCIRun.1.24.2/SCIRun/build/lib/libCore_Thread.so(_ZN6SCIRun6Thr
ead8run_bodyEv+0x12)
[0xb5cd06]/usr/local/SCIRun.1.24.2/SCIRun/build/lib/libCore_Thread.so
[0xb71251]
/lib/libpthread.so.0 [0x203b80]
/lib/libc.so.6(__clone+0x5e) [0xa539ce]
 -1208235104: main (state = blocking on semaphore, main wait)
 -1208149072: internal service manager (detached, state = blocking,
connection_list_condition_variable)
 -1208243280: TCL main event loop (detached, state = running)
 -1211393104: Scheduler (daemon, detached, state = blocking,
NetworkEditor request FIFO, Mailbox empty condition)
 126053296: Matlab (state = running)
 86055856: MatrixReader (state = blocking, Module execution FIFO, Mailbox 
empty condition)
 34933680: MatrixReader (state = blocking, Module execution FIFO, Mailbox 
empty condition)
 35068848: service server (detached, state = blocking,
packet_list_condition_variable)
 37972912: service server (detached, state = blocking,
packet_list_condition_variable)
 35204016: SimpleServiceOutputThread (detached, state = blocking,
SimpleServiceOutputThread Condition Variable)
 35339184: system_call_private_thread (detached, state = running)
 48905136: SimpleServiceOutputThread (detached, state = running)
 35474352: Matlab module thread (detached, state = startup)

Abort signalled by pid: 31308
Occured for thread: "Matlab"
resume(r)/dbx(d)/cvd(c)/kill thread(k)/exit(e)?

SCIRun.1.24.2 is running on Fedora Core 4, built from source.




Leon


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• [SCIRUN-USERS] error reading matrix files into matlab, lgraham, 11/21/2005

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