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[Seg3D] error building Seg3D (Spline Tool branch) Revision: 44884


Chronological Thread 
  • From: Ramón Casero Cañas <ramon.casero@comlab.ox.ac.uk>
  • To: "seg3d@sci.utah.edu" <seg3d@sci.utah.edu>
  • Subject: [Seg3D] error building Seg3D (Spline Tool branch) Revision: 44884
  • Date: Mon, 14 Feb 2011 23:39:14 +0000

Hi all,

I have added a menu option to load control points into the Seg3D branch with the Spline Tool

https://code.sci.utah.edu/svn/cibc/cibc/branches/seg3d_spline_tool/SCIRun

but the code has been updated since the version I had, so I couldn't commit the changes.

I have checked out a fresh copy, and tried to build, and the process breaks (see error message below).

This maybe has to do with the compiler version? Previously, I had to create a patch for Ubuntu 9.10 to force using v3.4 of gcc and g++.

Ubuntu is currently 10.10, which brings by default gcc v4.4.

I created a patch back in the day (patch-for-ubuntu-9.10.diff), but it fails with the current source code.



<ERROR>
Configured wxWidgets 2.8.9 for `x86_64-unknown-linux-gnu'

  Which GUI toolkit should wxWidgets use?                 GTK+ 2
  Should wxWidgets be compiled into single library?       no
  Should wxWidgets be compiled in debug mode?             no
  Should wxWidgets be linked as a shared library?         no
  Should wxWidgets be compiled in Unicode mode?           no
  What level of wxWidgets compatibility should be enabled?
                                       wxWidgets 2.4      no
                                       wxWidgets 2.6      yes
  Which libraries should wxWidgets use?
                                       jpeg               sys
                                       png                sys
                                       regex              sys
                                       tiff               sys
                                       zlib               sys
                                       odbc               no
                                       expat              sys
                                       libmspack          no
                                       sdl                no

rm -f /home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/lib/libwx_base-2.8.a
rm -f /home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/lib/libwx_base_net-2.8.a
ar rcu /home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/lib/libwx_base-2.8.a baselib_appbase.o baselib_arcall.o baselib_arcfind.o baselib_archive.o baselib_clntdata.o baselib_cmdline.o baselib_config.o baselib_convauto.o baselib_datetime.o baselib_datstrm.o baselib_dircmn.o baselib_dynarray.o baselib_dynlib.o baselib_dynload.o baselib_encconv.o baselib_extended.o baselib_ffile.o baselib_file.o baselib_fileback.o baselib_fileconf.o baselib_filefn.o baselib_filename.o baselib_filesys.o baselib_filtall.o baselib_filtfind.o baselib_fmapbase.o baselib_fs_arc.o baselib_fs_filter.o baselib_hash.o baselib_hashmap.o baselib_init.o baselib_intl.o baselib_ipcbase.o baselib_list.o baselib_log.o baselib_longlong.o baselib_memory.o baselib_mimecmn.o baselib_module.o baselib_mstream.o baselib_object.o baselib_platinfo.o baselib_powercmn.o baselib_process.o baselib_regex.o baselib_stdpbase.o baselib_sstream.o baselib_stopwatch.o baselib_strconv.o baselib_stream.o baselib_string.o baselib_sysopt.o baselib_tarstrm.o baselib_textbuf.o baselib_textfile.o baselib_tokenzr.o baselib_txtstrm.o baselib_uri.o baselib_variant.o baselib_wfstream.o baselib_wxchar.o baselib_xti.o baselib_xtistrm.o baselib_zipstrm.o baselib_zstream.o baselib_baseunix.o baselib_dir.o baselib_dlunix.o baselib_mimetype.o baselib_snglinst.o baselib_stackwalk.o baselib_stdpaths.o baselib_threadpsx.o baselib_event.o baselib_fs_mem.o baselib_msgout.o baselib_utilscmn.o baselib_utilsunx.o
ar rcu /home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/lib/libwx_base_net-2.8.a netlib_fs_inet.o netlib_ftp.o netlib_http.o netlib_protocol.o netlib_sckaddr.o netlib_sckfile.o netlib_sckipc.o netlib_sckstrm.o netlib_socket.o netlib_url.o netlib_gsocket.o
/home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/bk-deps g++ -c -o corelib_gsockgtk.o -I.pch/wxprec_corelib -D__WXGTK__ -DwxUSE_BASE=0 -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -I/home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/lib/wx/include/gtk2-ansi-release-static-2.8 -I./include -pthread -I/usr/include/gtk-2.0 -I/usr/lib/gtk-2.0/include -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/pango-1.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -DWX_PRECOMP -pthread -Wall -Wundef -Wno-ctor-dtor-privacy -O2 -fno-strict-aliasing ./src/gtk/gsockgtk.cpp
/home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/bk-deps g++ -c -o corelib_popupwin.o -I.pch/wxprec_corelib -D__WXGTK__ -DwxUSE_BASE=0 -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -I/home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/lib/wx/include/gtk2-ansi-release-static-2.8 -I./include -pthread -I/usr/include/gtk-2.0 -I/usr/lib/gtk-2.0/include -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/pango-1.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -DWX_PRECOMP -pthread -Wall -Wundef -Wno-ctor-dtor-privacy -O2 -fno-strict-aliasing ./src/gtk/popupwin.cpp
ranlib /home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/lib/libwx_base_net-2.8.a
ranlib /home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/lib/libwx_base-2.8.a
/home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/bk-deps g++ -c -o corelib_region.o -I.pch/wxprec_corelib -D__WXGTK__ -DwxUSE_BASE=0 -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -I/home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/lib/wx/include/gtk2-ansi-release-static-2.8 -I./include -pthread -I/usr/include/gtk-2.0 -I/usr/lib/gtk-2.0/include -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/pango-1.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -DWX_PRECOMP -pthread -Wall -Wundef -Wno-ctor-dtor-privacy -O2 -fno-strict-aliasing ./src/gtk/region.cpp
/home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/bk-deps g++ -c -o corelib_renderer.o -I.pch/wxprec_corelib -D__WXGTK__ -DwxUSE_BASE=0 -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -I/home/ramc/secure_data/comlab/SCIRun.dev.seg3d_spline_tool/wxGTK-2.8.9/lib/wx/include/gtk2-ansi-release-static-2.8 -I./include -pthread -I/usr/include/gtk-2.0 -I/usr/lib/gtk-2.0/include -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/pango-1.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -DWX_PRECOMP -pthread -Wall -Wundef -Wno-ctor-dtor-privacy -O2 -fno-strict-aliasing ./src/gtk/renderer.cpp
In file included from ./src/gtk/gsockgtk.cpp:21:
./include/wx/gsocket.h:40: error: using typedef-name ‘GSocket’ after ‘class’
/usr/include/glib-2.0/gio/giotypes.h:132: error: ‘GSocket’ has a previous declaration here
In file included from ./include/wx/gsocket.h:179,
                 from ./src/gtk/gsockgtk.cpp:21:
./include/wx/unix/gsockunx.h:40: error: using typedef-name ‘GSocket’ after ‘class’
/usr/include/glib-2.0/gio/giotypes.h:132: error: ‘GSocket’ has a previous declaration here
./src/gtk/gsockgtk.cpp: In function ‘void _GSocket_GDK_Input(void*, gint, GdkInputCondition)’:
./src/gtk/gsockgtk.cpp:34: error: ‘struct _GSocket’ has no member named ‘Detected_Read’
./src/gtk/gsockgtk.cpp:36: error: ‘struct _GSocket’ has no member named ‘Detected_Write’
./src/gtk/gsockgtk.cpp: In member function ‘virtual bool GSocketGUIFunctionsTableConcrete::Init_Socket(GSocket*)’:
./src/gtk/gsockgtk.cpp:56: error: ‘struct _GSocket’ has no member named ‘m_gui_dependent’
./src/gtk/gsockgtk.cpp:57: error: ‘struct _GSocket’ has no member named ‘m_gui_dependent’
./src/gtk/gsockgtk.cpp: In member function ‘virtual void GSocketGUIFunctionsTableConcrete::Destroy_Socket(GSocket*)’:
./src/gtk/gsockgtk.cpp:67: error: ‘struct _GSocket’ has no member named ‘m_gui_dependent’
./src/gtk/gsockgtk.cpp: In member function ‘virtual void GSocketGUIFunctionsTableConcrete::Install_Callback(GSocket*, GSocketEvent)’:
./src/gtk/gsockgtk.cpp:72: error: ‘struct _GSocket’ has no member named ‘m_gui_dependent’
./src/gtk/gsockgtk.cpp:75: error: ‘struct _GSocket’ has no member named ‘m_fd’
./src/gtk/gsockgtk.cpp:83: error: ‘struct _GSocket’ has no member named ‘m_server’
./src/gtk/gsockgtk.cpp:90: error: ‘struct _GSocket’ has no member named ‘m_fd’
./src/gtk/gsockgtk.cpp: In member function ‘virtual void GSocketGUIFunctionsTableConcrete::Uninstall_Callback(GSocket*, GSocketEvent)’:
./src/gtk/gsockgtk.cpp:98: error: ‘struct _GSocket’ has no member named ‘m_gui_dependent’
./src/gtk/gsockgtk.cpp:108: error: ‘struct _GSocket’ has no member named ‘m_server’
make: *** [corelib_gsockgtk.o] Error 1
make: *** Waiting for unfinished jobs....

***ERROR in build script
The failed command was:
make -j4
</ERROR>



Best regards,

Ramon.


--
Dr. Ramón Casero Cañas

Computational Biology
Computing Laboratory
University of Oxford
Wolfson Building, Parks Rd
Oxford OX1 3QD

tlf     +44 (0) 1865 610737
web     http://web.comlab.ox.ac.uk/people/Ramon.CaseroCanas
photos  http://www.flickr.com/photos/rcasero/

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