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Re: [shapeworks-dev-support] OpenVDB and IlmBase


Chronological Thread 
  • From: Allen Sanderson <allen@sci.utah.edu>
  • To: Alan Morris <amorris@sci.utah.edu>
  • Cc: shapeworks-dev-support@sci.utah.edu
  • Subject: Re: [shapeworks-dev-support] OpenVDB and IlmBase
  • Date: Wed, 17 Jun 2020 15:03:01 -0600
  • Ironport-sdr: 38v5Xn5l5ccoYLEqycGZGmYFAy+Ytyr8T5gRTY/v//w2kBk+B/0PrmUoeKUFGzqUgS2dznq3lI QF3R0kFJfihgcSvyxYa/WHKab9DIKk0yd7A+dHPYasm9YSQU5E/aPJpQ3ndwmDXgwSefdI3eXx feUhRad4+fObLl+i+Syfa4255qwq6Gc1NcziEOBW7V4IrQyItycoyUfjJ7ki2zHfqufU14ELm9 zJiQqPxMZjQ6kyNPKtADOKez5WwlD9qUNF9gTtC8uA0vFDJeaEgXt1psXUIkFv/SUqPqIuqyNX H3w=
Hi Alan,

Thanks, the issue is that while I was doing the activate.

conda activate shapeworks
the condo installs needed to be rerun. 

source conda_installs.sh
which is was not clear. Seems like there needs to be a way of letting one know that.


Next issue in building Xlnt on OS X I get the following when building XLNT


In file included from /Projects/ShapeWorks/ShapeWorks/dependencies/build/xlnt/source/cell/cell_reference.cpp:27:
/Projects/ShapeWorks/ShapeWorks/dependencies/build/xlnt/source/../include/xlnt/cell/cell_reference.hpp:268:16: error: implicit instantiation of undefined template 'std::__1::hash'
return hashstd::uint64_t{}(x.row() | static_caststd::uint64_t(x.column_index()) << 32);
^
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/memory:3171:29: note: template is declared here
template struct hash;
^

It would appear that hashstd::uint64_t is not defined explicitly ??? Not sure how best to resolve this issue. Has anyone else building OS X run into this issue? I have searched several forums but without any luck. I submitted an issue to XLNT.

Cheers,

Allen 




On Jun 17, 2020, at 12:49 PM, Alan Morris <amorris@sci.utah.edu> wrote:

Allen,

They are provided by conda.  See BUILD.md. 

Alan

On Wed, Jun 17, 2020 at 12:47 PM Allen Sanderson <allen@sci.utah.edu> wrote:
Hi,

I just decided to do a git pull.  It looks as though there is are additional dependencies for OpenVDB that may not have been taken into account at least for OS X:

OpenEXR
TBB
Boost

Here is the error for ILM which is in OpenEXR.


## Building OpenVDB...
fatal: destination path 'openvdb' already exists and is not an empty directory.
HEAD is now at c5e9e294... Merge pull request #580 from Idclip/7.0.0_releasecandidate
-- CMake Build Type: Release
-- Configuring for OpenVDB Version 7.0.0
-- Configuring for OpenVDB ABI Version 7
-- ----------------------------------------------------
-- ------------- Configuring OpenVDBCore --------------
-- ----------------------------------------------------
-- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) 
CMake Error at /Projects/miniconda3/envs/shapeworks/share/cmake-3.15/Modules/FindPackageHandleStandardArgs.cmake:137 (message):
  Could NOT find IlmBase (missing: IlmBase_INCLUDE_DIR IlmBase_LIB_COMPONENTS
  Half) (Required is at least version "2.2")
Call Stack (most recent call first):
  /Projects/miniconda3/envs/shapeworks/share/cmake-3.15/Modules/FindPackageHandleStandardArgs.cmake:378 (_FPHSA_FAILURE_MESSAGE)
  cmake/FindIlmBase.cmake:285 (find_package_handle_standard_args)
  openvdb/CMakeLists.txt:61 (find_package)



Cheers,

Allen


Allen Sanderson
SCI Institute
University of Utah





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