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Re: [shapeworks-users] Question about fitting with the SSM


Chronological Thread 
  • From: Shireen Elhabian <shireen@sci.utah.edu>
  • To: shapeworks-users@sci.utah.edu, "Schaardenburgh, F.E. van (Florianne)" <F.E.vanSchaardenburgh@umcutrecht.nl>
  • Cc: Shireen Elhabian <shireen@sci.utah.edu>, "Nguyen-3, H.C. (Chien)" <H.C.Nguyen-3@umcutrecht.nl>, "Magre-2, J. (Joell)" <J.Magre-2@umcutrecht.nl>, NAWAZISH KHAN <nawazish.khan@sci.utah.edu>, Alan Morris <amorris@sci.utah.edu>
  • Subject: Re: [shapeworks-users] Question about fitting with the SSM
  • Date: Fri, 17 Feb 2023 09:25:01 -0700
Dear Florianne,

Thanks for reaching out. We are glad to see ShapeWorks helping with your research project. We are currently working on adding this feature to ShapeWorks and expose it through ShapeWorksStudio. We are considering the case where the user would provide some sparse landmarks to reconstruct the full shape based on the shape model. Would it be possible to share a minimal data example for your use case? This would inform our development efforts in exposing this feature through Studio.

Regards
Shireen


------------------------------------------
Shireen Elhabian, M.Sc., Ph.D.
Associate Professor of Computer Science 
Scientific Computing and Imaging Institute
School of Computing
University of Utah
WEB 3608
72 Central Campus Drive, Salt Lake City, UT, 84112
Phone (801) 581-5982
Fax (801) 585-6513
Home Page: http://www.sci.utah.edu/~shireen

On Feb 17, 2023, at 3:48 AM, Schaardenburgh, F.E. van (Florianne) <F.E.vanSchaardenburgh@umcutrecht.nl> wrote:

Dear madam/sir,

I hope this email finds you well. I am a student at UMC Utrecht and I am currently using Shapeworks for my research project. I am reaching out to you because I have some questions about Shapeworks.

I am making a SSM of the humerus. The next step is to fit the SSM on a model to predict/fit the complete anatomy of humeri that have a fracture. So, I will fit the part of the humerus that is still intact on the SSM to determine the original anatomy of the other half of the humerus. I wonder if this is easy to do in Shapeworks Studio. Is it necessary to use the DeepSSM function for this? Or can the SSM be exported to fit the model on a different software? How many coding skills do you need for this?

Thank you very much for your time and assistance in this matter. I look forward to hearing from you soon.

Kind regards,

Florianne van Schaardenburgh
 
image001.png
 
Stagaire Divisie Heelkundige Specialismen 3D lab
Universitair Medisch Centrum Utrecht
 

 

 

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