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[SCIRUN-USERS] Fwd: scirun crashes on my system


Chronological Thread 
  • From: "Mauro A. Cremonini" <mauro.cremonini@unibo.it>
  • To: scirun-users@sci.utah.edu
  • Subject: [SCIRUN-USERS] Fwd: scirun crashes on my system
  • Date: Wed, 27 Dec 2006 10:07:37 +0100


Dear collegues,
I downloaded and compiled the latest version of scirun. The previous version
run well on my laptop under suse 10.1, but this version crashes upon loading
any net file.
This is what happens when I try to load the isocontour net file:


Thread "OpenGL: .uiSCIRun_Render_ViewScene_0-ViewWindow_0.wframe.draw"(pid
17789) caught signal SIGSEGV at address (nil) (segmentation violation)
Backtrace:
/home/mac/SCIRun/bin/lib/libCore_Thread.so [0xb7cf8295]
[0xffffe420]
/usr/X11R6/lib/modules/dri/radeon_dri.so(_mesa_GetString+0x18) [0xb4d67788]
/home/mac/SCIRun/bin/lib/libCore_Geom.so(glewInit+0x20) [0xb7e388a0]
/home/mac/SCIRun/bin/lib/libDataflow_TkExtensions.so(sci_glew_init+0x29)
[0xb7ce2729]
/home/mac/SCIRun/bin/lib/libDataflow_Modules_Render.so(_ZN6SCIRun6OpenGL12red
raw_frameEv+0x84) [0xb5799ac4]
/home/mac/SCIRun/bin/lib/libDataflow_Modules_Render.so(_ZN6SCIRun6OpenGL11red
raw_loopEv+0x5b7) [0xb57a01a7]
/home/mac/SCIRun/bin/lib/libDataflow_Modules_Render.so(_ZN6SCIRun12OpenGLHelp
er3runEv+0x25) [0xb57a10b5]
/home/mac/SCIRun/bin/lib/libCore_Thread.so(_ZN6SCIRun6Thread8run_bodyEv+0x13)
[0xb7cf1573]
/home/mac/SCIRun/bin/lib/libCore_Thread.so [0xb7cf9d31]
/lib/libpthread.so.0 [0xb647c34b]
/lib/libc.so.6(__clone+0x5e) [0xb630365e]
 3055752880: main (state = blocking on semaphore, main wait)
 3059112864: internal service manager (detached, state = blocking,
connection_list_condition_variable)
 3055492000: Scheduler (daemon, detached, state = blocking, NetworkEditor
request FIFO, Mailbox empty condition)
 3055356832: TCL main event loop (detached, state = running)
 3008531360: Event Manager (detached, state = blocking, EventManager, Mailbox
empty condition)
 3007720352: ReadField (state = blocking, Module execution FIFO, Mailbox
 empty condition)
 3007314848: GetFieldBoundary (state = blocking, Module execution FIFO,
Mailbox empty condition)
 3007855520: ShowField (state = blocking, Module execution FIFO, Mailbox
 empty condition)
 3007450016: CreateStandardColorMaps (state = blocking, Module execution
 FIFO, Mailbox empty condition)
 3007990688: RescaleColorMap (state = blocking, Module execution FIFO,
 Mailbox empty condition)
 3007585184: ViewScene (state = blocking, OpenGL renderer receive mailbox,
Mailbox empty condition)
 3008125856: ExtractIsosurface (state = blocking, Module execution FIFO,
Mailbox empty condition)
 3008396192: ApplyMappingMatrix (state = blocking, Module execution FIFO,
Mailbox empty condition)
 2975157152: OpenGL: .uiSCIRun_Render_ViewScene_0-ViewWindow_0.wframe.draw
(state = running)

Abort signalled by pid: 17789
Occured for thread:
"OpenGL: .uiSCIRun_Render_ViewScene_0-ViewWindow_0.wframe.draw"
Unrecognized option, exiting
Exiting
terminate called after throwing an instance of 'SCIRun::ThreadError'
Thread "OpenGL: .uiSCIRun_Render_ViewScene_0-ViewWindow_0.wframe.draw"(pid
17789) caught signal SIGABRT (Abort)
Backtrace:
/home/mac/SCIRun/bin/lib/libCore_Thread.so [0xb7cf8295]
[0xffffe420]
[0xffffe410]
/lib/libc.so.6(gsignal+0x50) [0xb626e7d0]
/lib/libc.so.6(abort+0x103) [0xb626fea3]
/usr/lib/libstdc++.so.6(_ZN9__gnu_cxx27__verbose_terminate_handlerEv+0x150)
[0xb644c3a0]
/usr/lib/libstdc++.so.6 [0xb6449dc5]
/usr/lib/libstdc++.so.6 [0xb6449e02]
/usr/lib/libstdc++.so.6 [0xb6449f3a]
/home/mac/SCIRun/bin/lib/libCore_Thread.so(_ZN6SCIRun6Thread4joinEv+0xcd)
[0xb7cf941d]
/home/mac/SCIRun/bin/lib/libDataflow_Modules_Render.so(_ZN6SCIRun6OpenGL11kil
l_helperEv+0x4f) [0xb579409f]
/home/mac/SCIRun/bin/lib/libDataflow_Modules_Render.so(_ZN6SCIRun6OpenGLD1Ev+
0x64) [0xb5797eb4]
/home/mac/SCIRun/bin/lib/libDataflow_Modules_Render.so(_ZN6SCIRun10ViewWindow
D0Ev+0x34) [0xb57b0644]
/home/mac/SCIRun/bin/lib/libDataflow_Modules_Render.so [0xb5809f02]
/home/mac/SCIRun/bin/lib/libCore_Thread.so(_ZN6SCIRun14CleanupManager14call_c
allbacksEv+0x47) [0xb7cf0487]
/home/mac/SCIRun/bin/lib/libCore_Thread.so(_ZN6SCIRun6Thread7exitAllEi+0x37)
[0xb7cf7fd7]
/home/mac/SCIRun/bin/lib/libCore_Thread.so(_ZN6SCIRun6Thread9niceAbortEPv+0x3
2b) [0xb7cf214b]
/home/mac/SCIRun/bin/lib/libCore_Thread.so [0xb7cf8295]
[0xffffe420]
/home/mac/SCIRun/bin/lib/libCore_Geom.so(glewInit+0x20) [0xb7e388a0]
/home/mac/SCIRun/bin/lib/libDataflow_TkExtensions.so(sci_glew_init+0x29)
[0xb7ce2729]
/home/mac/SCIRun/bin/lib/libDataflow_Modules_Render.so(_ZN6SCIRun6OpenGL12red
raw_frameEv+0x84) [0xb5799ac4]
/home/mac/SCIRun/bin/lib/libDataflow_Modules_Render.so(_ZN6SCIRun6OpenGL11red
raw_loopEv+0x5b7) [0xb57a01a7]
/home/mac/SCIRun/bin/lib/libDataflow_Modules_Render.so(_ZN6SCIRun12OpenGLHelp
er3runEv+0x25) [0xb57a10b5]
/home/mac/SCIRun/bin/lib/libCore_Thread.so(_ZN6SCIRun6Thread8run_bodyEv+0x13)
[0xb7cf1573]
/home/mac/SCIRun/bin/lib/libCore_Thread.so [0xb7cf9d31]
/lib/libpthread.so.0 [0xb647c34b]
/lib/libc.so.6(__clone+0x5e) [0xb630365e]
 3055752880: main (state = blocking on semaphore, main wait)
 3059112864: internal service manager (detached, state = blocking,
connection_list_condition_variable)
 3055492000: Scheduler (daemon, detached, state = blocking, NetworkEditor
request FIFO, Mailbox empty condition)
 3055356832: TCL main event loop (detached, state = running)
 3008531360: Event Manager (detached, state = blocking, EventManager, Mailbox
empty condition)
 3007720352: ReadField (state = blocking, Module execution FIFO, Mailbox
 empty condition)
 3007314848: GetFieldBoundary (state = blocking, Module execution FIFO,
Mailbox empty condition)
 3007855520: ShowField (state = blocking, Module execution FIFO, Mailbox
 empty condition)
 3007450016: CreateStandardColorMaps (state = blocking, Module execution
 FIFO, Mailbox empty condition)
 3007990688: RescaleColorMap (state = blocking, Module execution FIFO,
 Mailbox empty condition)
 3007585184: ViewScene (state = blocking, OpenGL renderer receive mailbox,
Mailbox empty condition)
 3008125856: ExtractIsosurface (state = blocking, Module execution FIFO,
Mailbox empty condition)
 3008396192: ApplyMappingMatrix (state = blocking, Module execution FIFO,
Mailbox empty condition)
 2975157152: OpenGL: .uiSCIRun_Render_ViewScene_0-ViewWindow_0.wframe.draw
(state = running)

Abort signalled by pid: 17789
Occured for thread:
"OpenGL: .uiSCIRun_Render_ViewScene_0-ViewWindow_0.wframe.draw"
Unrecognized option, exiting
Exiting

--------------

Have you any suggestion?

My graphic card is:


01:00.0 VGA compatible controller: ATI Technologies Inc Radeon Mobility M7 LW
[Radeon Mobility 7500] (prog-if 00 [VGA])
        Subsystem: IBM Unknown device 0509
        Flags: bus master, stepping, fast Back2Back, 66MHz, medium devsel,
latency 66, IRQ 11
        Memory at e8000000 (32-bit, prefetchable) [size=128M]
        I/O ports at 3000 [size=256]
        Memory at d0100000 (32-bit, non-prefetchable) [size=64K]
        [virtual] Expansion ROM at d0120000 [disabled] [size=128K]
        Capabilities: [58] AGP version 2.0
        Capabilities: [50] Power Management version 2

ad maybe you need this:

glxgears  -info
GL_MAX_VIEWPORT_DIMS=4096/4096
GL_RENDERER   = Mesa DRI Radeon 20050528 AGP 4x x86/MMX/SSE2 TCL
GL_VERSION    = 1.2 Mesa 6.4.2
GL_VENDOR     = Tungsten Graphics, Inc.
GL_EXTENSIONS = GL_ARB_imaging GL_ARB_multisample GL_ARB_multitexture
GL_ARB_texture_border_clamp GL_ARB_texture_compression GL_ARB_texture_env_add
GL_ARB_texture_env_combine GL_ARB_texture_env_crossbar
GL_ARB_texture_env_dot3 GL_ARB_texture_mirrored_repeat
GL_ARB_texture_rectangle GL_ARB_transpose_matrix GL_ARB_window_pos
GL_EXT_abgr GL_EXT_bgra GL_EXT_blend_color GL_EXT_blend_logic_op
GL_EXT_blend_minmax GL_EXT_blend_subtract GL_EXT_clip_volume_hint
GL_EXT_compiled_vertex_array GL_EXT_convolution GL_EXT_copy_texture
GL_EXT_draw_range_elements GL_EXT_histogram GL_EXT_packed_pixels
GL_EXT_polygon_offset GL_EXT_rescale_normal GL_EXT_secondary_color
GL_EXT_separate_specular_color GL_EXT_stencil_wrap GL_EXT_subtexture
GL_EXT_texture GL_EXT_texture3D GL_EXT_texture_edge_clamp
GL_EXT_texture_env_add GL_EXT_texture_env_combine GL_EXT_texture_env_dot3
GL_EXT_texture_filter_anisotropic GL_EXT_texture_lod_bias
GL_EXT_texture_mirror_clamp GL_EXT_texture_object GL_EXT_texture_rectangle
GL_EXT_vertex_array GL_APPLE_packed_pixels GL_ATI_texture_env_combine3
GL_ATI_texture_mirror_once GL_IBM_rasterpos_clip
GL_IBM_texture_mirrored_repeat GL_MESA_ycbcr_texture GL_MESA_window_pos
GL_NV_blend_square GL_NV_light_max_exponent GL_NV_texture_rectangle
GL_NV_texgen_reflection GL_OES_read_format GL_SGI_color_matrix
GL_SGI_color_table GL_SGIS_generate_mipmap GL_SGIS_texture_border_clamp
GL_SGIS_texture_edge_clamp GL_SGIS_texture_lod

I wuold post this on the wiki...but it seems that one cannot register for
editing it.

Thank you very much and happy new year.
Mauro



===========================================
Mauro Andrea Cremonini, PhD
Department of Food Science
University of Bologna
http://www.maurocremonini.it
===========================================
===========================================================================
== The SCIRun Users mailing list: send email to majordomo@sci.utah.edu   ==
== for more details.                                                     ==
== Please acknowledge use of SCIRun in your papers and reports:          ==
==   see http://software.sci.utah.edu/scirun-biopse_citation.bib         ==
===========================================================================




  • [SCIRUN-USERS] Fwd: scirun crashes on my system, Mauro A. Cremonini, 12/27/2006

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