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[SCIRUN-USERS] Re: running ITK filters from Matlab: new architecture

Chronological Thread 
  • From: Ramón Casero Cañas <>
  • To: Luis Ibanez <>
  • Cc: Mailing list SCIRun <>, Ghassan Hamarneh <>, itk <>
  • Subject: [SCIRUN-USERS] Re: running ITK filters from Matlab: new architecture
  • Date: Mon, 23 May 2011 01:46:04 +0100

On 23/05/11 01:21, Luis Ibanez wrote:
Hi Ramon,

Many thanks for making your code available.


Just to clarify,

     The source code for MATITK is available
      as part the Insight Journal publication:

Hi Luis,

Thanks for your reply. Yes, Ghassan cleared that up too. Sorry for the confusion, it was not ill-meant.

As I mentioned in my previous email to the SCI mailing list, it be terrific if somebody could try to compile our code for Windows/Mac and give us some feedback. I'd say the project is in alpha or beta now. It works for me in Linux 64 bit.

The Gerardus mailing list is here

The code is here

can be checked out with e.g.

svn checkout gerardus

and to build one has to give the Matlab path in CMakeLists.txt, and then

$ cd gerardus/matlab
$ mkdir bin
$ cmake ..
$ make
$ make install

and add the Toolbox directories in Gerardus to the Matlab path.

Best regards,


Dr. Ramón Casero Cañas

Computational Biology, Computing Laboratory
University of Oxford
Wolfson Building, Parks Rd
Oxford OX1 3QD

tlf     +44 (0) 1865 610737

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