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Re: [SCIRUN-USERS] Advice


Chronological Thread 
  • From: Jess Tate <jess@sci.utah.edu>
  • To: "festim.xhoxhaj@student.emw.hs-anhalt.de" <festim.xhoxhaj@student.emw.hs-anhalt.de>
  • Cc: "scirun-users@sci.utah.edu List" <scirun-users@sci.utah.edu>
  • Subject: Re: [SCIRUN-USERS] Advice
  • Date: Tue, 8 Nov 2016 15:36:53 -0700

Hi Festim,

What kind of visualization do you plan on doing? We have other software that might be more that you need.  Seg3D (seg3d.org) is a software that you can use to segment medical images.  You may need to use this software to convert dicoms to nrrd files to use in scirun.  Also, we have a software called imagevis3D (imagevis3d.org) that can be used to generate volume rendering visualization of image scans and other data.  SCIRun does have some good visualization tools too.

cheers,
Jess




On Nov 8, 2016, at 3:30 PM, festim.xhoxhaj@student.emw.hs-anhalt.de wrote:

Hello Ayla and others

Thank you all for your replies.

So, Ayla, I am going to do a project for 3D visualization. More specifically my task is to create an automated procedure to do the 2D-3D conversion of the MRI images.

Bye Festim

From: Ayla Khan [ayla@sci.utah.edu]
Sent: Monday, November 07, 2016 8:53 PM
To: Xhoxhaj, Festim
Cc: scirun-users@sci.utah.edu
Subject: Re: [SCIRUN-USERS] Advice

Hi Festim,

You can find SCIRun download information and tutorials at www.scirun.org. Is there a particular research area you are planning on using SCIRun for?

Ayla

On Nov 7, 2016, at 2:07 AM, festim.xhoxhaj@student.emw.hs-anhalt.de wrote:

Greetings scirun users

I got to know about scirun a couple weeks ago, since my Professor suggested me to use it for a project of mine in Biomedical engineering. He also told me that i have to decide whether I am going to use the software which is ready, or go by C++ programming. So i thought I would ask for suggestions and advice on that. Any thought is very welcome. 

Best regards
Festim Xhoxhaj
Biomedical Engineering
University of Anhalt
Kothen Germany

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