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Title: RE: [Seg3D] Re: Build error

Hi Ayla,

Any news on the MRC?


Matthew Dougherty
713-433-3849
National Center for Macromolecular Imaging
Baylor College of Medicine/Houston Texas USA
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-----Original Message-----
From: Ayla Khan [mailto:ayla@sci.utah.edu]
Sent: Tue 2/2/2010 4:08 PM
To: seg3d@sci.utah.edu
Subject: [Seg3D] Re: Build error

Hi Xiang,

The Seg3D 1.12 build breaks on GCC 4.4 compilers, which is the default 
compiler shipped with OpenSuSE 11.2.  You can build the trunk version 
(version 1.13) from Subversion by following the instructions on this 
page (http://www.sci.utah.edu/SCIRunDocs/index.php/CIBC:Seg3D:Documentation:Building
), or grab the latest Seg3D 1.13 from the SCI software site.  Do check 
for updates regularly though.

Ayla

On Feb 1, 2010, at 8:01 AM, Xiang Hao wrote:

> Hi,
>
> I am trying to build seg3D_1.12 on my desktop(Opensuse11.2), but I 
> got this error. What does this mean?
>
> Cheers,
> Xiang
>
> -------------------------------------------------------
> Parsing arguments...
> CMake args:
> Build Type: Release
> Build SCIRun Dataflow: 1
> SCIRun Packages: SCIRun,BioPSE,Teem,MatlabInterface
> Build Insight ToolKit: 0
> Build wxWidgets: 0
> Get CMake: 0
> Make Flags:
> Build Shared Libs: 1
> With X11: 1
> cmakebin=/usr/bin/cmake
> ctestbin=/usr/bin/ctest --ctest-config=/home/sci/hao/software/
> Seg3D_1.12_20090930_source/src/CTestConfig.cmake
> svnbin=/usr/bin/svn
> Updating SCIRUN source...
> -- Configuring 
> BioMesh3D
>                                                                                      
> -- FYI: This is a 64 bit 
> build
> .                                                                              
> -- Configuring External 
> Packages
>                                                                              
> -- Configuring zlib
> -- Configuring libpng
> -- Configuring teem
> -- Configuring glew
> -- Configuring slivr
> -- Configuring freetype
> -- Configuring libxml2
> -- Configuring TCL
> -- Configuring TK
> -- Configuring ITCL
> -- Configuring ITK
> -- Configuring iWidgets
> -- Configuring BLT
> -- Configuring tetgen
> -- Configuring particle system
> -- Configuring vispack
> --
> -- Configuring done
> -- Generating done
> -- Build files have been written to: /home/sci/hao/software/
> Seg3D_1.12_20090930_source/bin
> Building SCIRun using make...
> [  0%] Built target copy_scripts
> [  0%] Built target zlib
> [  1%] Built target png
> [ 14%] Built target teem
> [ 14%] Built target miter
> [ 14%] Built target mrender
> [ 14%] Built target nrrdSanity
> [ 15%] Built target overrgb
> [ 15%] Built target tend
> [ 15%] Built target unu
> [ 15%] Built target vprobe
> [ 15%] Built target glew
> [ 15%] Building CXX object Externals/slivr/CMakeFiles/slivrG.dir/
> Point.cc.o
> /home/sci/hao/software/Seg3D_1.12_20090930_source/src/Externals/
> slivr/Point.cc: In member function 'std::string 
> SLIVR::Point::get_string() const':
> /home/sci/hao/software/Seg3D_1.12_20090930_source/src/Externals/
> slivr/Point.cc:51: error: 'sprintf' was not declared in this scope
> make[2]: *** [Externals/slivr/CMakeFiles/slivrG.dir/Point.cc.o] 
> Error 1
> make[1]: *** [Externals/slivr/CMakeFiles/slivrG.dir/all] Error 2
> make: *** [all] Error 2
> Building SCIRun returned an error
>
> Either the code failed to build properly or
>
> the testing programs failed to complete without
>
> every single test program passing the test.
>

-----------------------------
Ayla Khan
ayla@sci.utah.edu
(801) 585-0333

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• [Seg3D] Build error, Xiang Hao, 02/01/2010
  • [Seg3D] Re: Build error, Ramón Casero Cañas, 02/02/2010
    • [Seg3D] Re: Re: Build error, Andreas Maier, 02/02/2010
  • [Seg3D] Re: Build error, Ayla Khan, 02/02/2010
    • [Seg3D] RE: Re: Build error, Dougherty, Matthew T., 02/02/2010

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