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Re: [Seg3D] Seg3d


Chronological Thread 
  • From: Matthew Muntean <matthew@muntean.com>
  • To: Jess Tate <jess@sci.utah.edu>, Gregory Jones <greg@sci.utah.edu>
  • Cc: Elizaveta.Chabanova@regionh.dk, Corinne Garcia <cgarcia@sci.utah.edu>, SCI Webmaster <webmaster@sci.utah.edu>, seg3d@sci.utah.edu
  • Subject: Re: [Seg3D] Seg3d
  • Date: Sat, 15 Oct 2016 12:50:54 +1300

Hi, just jumping in here on a tangential note. I've used both Slicer and Seg3D for awhile, lately for 3d printing.

I have found Slicer has some very useable poly reduction tools - is there a recommended pipeline for polygon reduction from Seg3D, that generates watertight reduced models?

Thanks.

On 10/15/2016 4:17 AM, Jess Tate wrote:
Hi Elizaveta,

You can use Seg3D to segment the volume that you are interested in studying and find the volume of that segmentation.  Slicer probably allows for something similar. The segmentation process can be easy or challenging depending on the scan quality and type and your results specifications.  The volume calculation is quick after that.  Please see the seg3d tutorial for more information about segmentation (seg3d.org).  You can also use this email list (seg3d@sci.utah.edu) to ask questions.

cheers,
Jess


On Oct 14, 2016, at 5:35 AM, Gregory Jones <greg@sci.utah.edu> wrote:

Hello Elizaveta,

Your question is probably best answered by the group working on seg3d. Thus, I have copied the seg3d team with this email. If you don’t hear from them soon, please let me know.

Cheers,
Greg

Elizaveta Chabanova <Elizaveta.Chabanova@regionh.dk>

Affiliation: Copenhagen University Hospital Herlev, Department of Diagnostic Radiology X, Denmark 

Re Software: {Software:value}

Subject: Volume measurments

Message: Hi, I have to measure fat volumes based on MRI data. Is ti possible to measure the volumes from DICOM data using one of the SW - Seg3D or 3DSlicer ? 

Best regard

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