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RE: [Seg3D] distorted volume when importing DICOM


Chronological Thread 
  • From: "Harris, Michael" <harrismi@wustl.edu>
  • To: "seg3d@sci.utah.edu" <seg3d@sci.utah.edu>
  • Subject: RE: [Seg3D] distorted volume when importing DICOM
  • Date: Wed, 16 May 2018 21:52:43 +0000
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Hi,

 

When I import a DICOM image series, the resulting volume is abnormally stretched in the z direction.  The images have isotropic 0.33x0.33x0.33mm spacing and the image set volume is equally sized on all sides.  I can resample the images to 1x1x1 and import them without any apparent distortion, but that resolution is a little too coarse for me. Is there a way to correct the distortion?  I really just need to convert the images to nrrd format for ShapeWorks.

 

Thanks,

Mike

_________________________

Michael D. Harris, PhD

Assistant Professor

Washington University School of Medicine

Program in Physical Therapy

Department of Orthopaedic Surgery

Department of Mechanical Engineering and Materials Science

Office: 314-286-1411 | harrismi@wustl.edu

 

 

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