Many thanks, Penny.

 

However, although it is indicated that the cutting plane is set in the command window output, the final correspondence points are not being placed above the specified plane. Because this works within Studio (figure attached), I’m inclined to think that this is a syntax issue (optimization code below). Do you have any insight regarding what is causing this?

 

<number_of_particles>256</number_of_particles>

<iterations_per_split>400</iterations_per_split>

<starting_regularization>1000</starting_regularization>

<ending_regularization>10</ending_regularization>

<optimization_iterations>500</optimization_iterations>

<checkpointing_interval>20</checkpointing_interval>

<relative_weighting>3</relative_weighting>

<procrustes_scaling>1</procrustes_scaling>

<procrustes_interval>1</procrustes_interval>

<adaptivity_strength>3</adaptivity_strength>

<transform_file>Proxfemur.transform</transform_file>

 

<inputs>

                183618Prox_DT.nrrd

                184916Prox_DT.nrrd

                187184Prox_DT.nrrd

                187609Prox_DT.nrrd

                188598Prox_DT.nrrd

                188816Prox_DT.nrrd

                190402Prox_DT.nrrd

                190434Prox_DT.nrrd

                190841Prox_DT.nrrd

                193572Prox_DT.nrrd

</inputs>

 

<cutting_planes>

               

                12 93 -24 -63 -40 -24 63 -40 -24

                12 93 -24 -63 -40 -24 63 -40 -24

                12 93 -24 -63 -40 -24 63 -40 -24

                12 93 -24 -63 -40 -24 63 -40 -24

                12 93 -24 -63 -40 -24 63 -40 -24

                12 93 -24 -63 -40 -24 63 -40 -24

                12 93 -24 -63 -40 -24 63 -40 -24

                12 93 -24 -63 -40 -24 63 -40 -24

                12 93 -24 -63 -40 -24 63 -40 -24

                12 93 -24 -63 -40 -24 63 -40 -24

</cutting_planes>

 

<output_points_prefix>

                \finalCP\output_points

</output_points_prefix>

 

 

 

Hi Brecca,

 

You should be able to use the tag <cutting_planes> and then paste the nine points for the plane of each shape on a separate line, instead of using the file.

 

 

 

Hello,

 

What is the syntax for calling a cutting plane within the correspondence points optimization in ShapeWorks CLT? Currently I am calling <cutPlanes_file>cutting_plane.txt</cutPlanes_file> when using ShapeWorksRun.exe, but to no avail. I am able to successfully use this cutting_plane.txt file in Studio, but would like to implement in CLT with a larger input sample size.

 

--

Brecca M. M. Gaffney, PhD

Postdoctoral Research Scholar | Program in Physical Therapy

Washington University School of Medicine

Office: 314-273-3228

 

 

 

The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail.

---