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Re: [shapeworks-users] Scapula Test Case


Chronological Thread 
  • From: Shireen Elhabian <shireen@sci.utah.edu>
  • To: shapeworks-users@sci.utah.edu, Atkins Penny <penny.atkins@hest.ethz.ch>
  • Cc: Shireen Elhabian <shireen@sci.utah.edu>, Karthik Karanth <karthik@sci.utah.edu>, Karthik Karanth <karanth.karthik@gmail.com>
  • Subject: Re: [shapeworks-users] Scapula Test Case
  • Date: Tue, 8 Sep 2020 11:11:36 -0600
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Hi Penny,

Absolutely. We are interested in testing the surface-based approach on different test cases. I am cc’ing Karthik who is working on extending this approach to handle more complex surface geometries. Please feel free to share with us a test set of your surfaces to try them out on our side.

thanks and best regards
Shireen


------------------------------------------
Shireen Elhabian, M.Sc., Ph.D.
Research Assistant Professor, School of Computing
Research Computer Scientist, Scientific Computing and Imaging Institute
University of Utah
WEB 2815
72 Central Campus Drive, Salt Lake City, UT, 84112
Phone (801) 587-3206
Fax (801) 585-6513
Home Page: http://www.sci.utah.edu/~shireen

On Sep 7, 2020, at 2:13 PM, Atkins Penny <penny.atkins@hest.ethz.ch> wrote:

Dear ShapeWorks Users and Development Team,

I mentioned during the last users meeting that I was working on a project with the scapula. To date, I have been using the command line tool GenerateFidsFilesFromMeshes to generate the distance transforms, but the files become prohibitively large with smaller voxel sizes, so I am very interested in working with the new surface-based implementation. I have received permission from my collaborators to share a few of our surfaces as a test case for the ShapeWorks pipeline, so if you are still interested please let me know.

I look forward to hearing from you. Best, Penny
__________________
Penny Atkins, PhD
Post-doctoral Researcher
Institute for Biomechanics, ETH Zurich
Phone +41 44 633 91 95
Cell +41 78 905 71 67
HCP H 11.3, Leopold-Ruzicka-Weg 4, 8093 Zürich


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