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Re: [shapeworks-users] ShapeWorks Inquiry : UPenn Christopher Pinto


Chronological Thread 
  • From: Shireen Elhabian <shireen@sci.utah.edu>
  • To: Christopher Pinto <capinto@seas.upenn.edu>
  • Cc: Shireen Elhabian <shireen@sci.utah.edu>, Alan Morris <amorris@sci.utah.edu>, Cameron Christensen <cam@sci.utah.edu>, shapeworks-users@sci.utah.edu
  • Subject: Re: [shapeworks-users] ShapeWorks Inquiry : UPenn Christopher Pinto
  • Date: Mon, 2 Nov 2020 16:48:12 -0700
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Hi Chris,

Thanks for your interest in ShapeWorks and we are looking forward to helping you out with your data. We have relaxed the requirement for Studio to load same image sizes. Could you share the log file with us to troubleshot Studio’s crashing?

Shireen


------------------------------------------
Shireen Elhabian, M.Sc., Ph.D.
Research Assistant Professor, School of Computing
Research Computer Scientist, Scientific Computing and Imaging Institute
University of Utah
WEB 2815
72 Central Campus Drive, Salt Lake City, UT, 84112
Phone (801) 587-3206
Fax (801) 585-6513
Home Page: http://www.sci.utah.edu/~shireen

On Nov 2, 2020, at 1:59 PM, Cameron Christensen <cam@sci.utah.edu> wrote:

Hi Chris,

Thanks for reaching out. 
Coincidentally, I've been working on this exact task this weekend. 
Do you have a sample stl mesh I can use? 
I'll give it a try using Python and get back to you with a solution.

Best,
Cameron

On Mon, Nov 2, 2020 at 1:06 PM Christopher Pinto <capinto@seas.upenn.edu> wrote:
Hello Cameron!

My name is Christopher Pinto and I am an associate researcher the University of Pennsylvania. We were interested in using ShapeWorks for a shape analysis of humeral heads and scapular protrusions. Most of the data is in the STL format and we are having trouble converting to an NRRD format. I can get it into NRRD by converting things in 3DSlicer, but I can’t get the NRRDs to be the same size (bounding box issue) or to have a small file size. The GUI for Mac also crashes often and is a cause of concern.

So is there an easier/preferred way to fo from STL to NRRD? Any advice would help.

Thanks, Chris



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