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Re: [Seg3D] Batch resample from multiple size masks


Chronological Thread 
  • From: Paul Holcomb <paul.holcomb@gmail.com>
  • To: "seg3d@sci.utah.edu" <seg3d@sci.utah.edu>
  • Subject: Re: [Seg3D] Batch resample from multiple size masks
  • Date: Wed, 25 Mar 2015 10:23:29 -0400
Ayla,

Here's a picture with masks that I want to resample.  The VCN_c18_input04_part1-3 masks need to be resampled into the large (1442x1344x1852) data volume to be combined with other segmentations.  Ideally, I would like a way to resample all of them at once.

Thanks!

Paul

On Tue, Mar 24, 2015 at 3:42 PM, Ayla Khan <ayla@sci.utah.edu> wrote:
Hi Paul,

Could you please send pictures?

Thanks,

Ayla

On Mar 23, 2015, at 8:12 AM, Paul Holcomb wrote:

> Dear Seg3D team,
>
> I have a single object that has been segmented incrementally, so it exists as several different masks of varying sizes, but all in the context of a larger single volume.  I'd like to piece this object back together as quickly as possible.  Is there a way to set up a batch resample to put multiple layers into a single larger volume?
>
> I hope that makes sense.  If not, let me know and I can send pictures.
>
> Paul Holcomb
>
> --
> "Hope is a state of mind, not of the world. Hope, in this deep and powerful sense, is not the same as joy that things are going well, or willingness to invest in enterprises that are obviously heading for success, but rather an ability to work for something because it is good." ~Vaclav Havel




--
"Hope is a state of mind, not of the world. Hope, in this deep and powerful sense, is not the same as joy that things are going well, or willingness to invest in enterprises that are obviously heading for success, but rather an ability to work for something because it is good." ~Vaclav Havel

Attachment: Three segmentations to resample to large volume.tif
Description: TIFF image


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