Hi Murat,

If you disable the center option in groom, the resulting volumes would line up exactly with the original volumes without having this shift issue ...

Shireen

On 02/29/2016 12:34 PM, Murat Maga wrote:

Hi,

 

I want to visualize the distribution of the points on labels maps I fed into shapeworks and I encountered a strange issue. The groomed file lines up well, but not the original volume. There seems to be some sort of a shift in coordinates. Groom ran with these parameters, the only thing I can see that will shift the coordinates is the center (which was applied to the rendering).

 

ShapeWorksGroom.openMP /cm/shared/data/n2_molars/shapeworks/label3.affine.masked/shapeworks.groom.xml center  isolate hole_fill antialias fastmarching blur

 

Any idea what might be driving this shift?

Thanks,

M