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[shapeworks-users] Putting points on original volumes


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  • From: Murat Maga <maga@uw.edu>
  • To: Shireen Elhabian <shireen@sci.utah.edu>
  • Cc: "shapeworks-users@sci.utah.edu" <shapeworks-users@sci.utah.edu>
  • Subject: [shapeworks-users] Putting points on original volumes
  • Date: Mon, 29 Feb 2016 19:34:23 +0000
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Hi,

 

I want to visualize the distribution of the points on labels maps I fed into shapeworks and I encountered a strange issue. The groomed file lines up well, but not the original volume. There seems to be some sort of a shift in coordinates. Groom ran with these parameters, the only thing I can see that will shift the coordinates is the center (which was applied to the rendering).

 

ShapeWorksGroom.openMP /cm/shared/data/n2_molars/shapeworks/label3.affine.masked/shapeworks.groom.xml center  isolate hole_fill antialias fastmarching blur

 

Any idea what might be driving this shift?

Thanks,

M

 

 

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