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Re: [SCIRUN-USERS] Text- Based Low Resolution Torso Geometry Data


Chronological Thread 
  • From: David Weinstein <dmw@sci.utah.edu>
  • To: Arda Kurt <ardakurtt@gmail.com>
  • Cc: <scirun-users@sci.utah.edu>
  • Subject: Re: [SCIRUN-USERS] Text- Based Low Resolution Torso Geometry Data
  • Date: Sun, 15 Jan 2006 14:55:59 -0700
Hi Arda,

SCIRun has command-line tools for turning SCIRun data files into plain ASCII format -- they're in the SCIRun/obj/StandAlone/convert/ directory.  The one you should use for converting the surface files (*.ts.fld) is called TriSurfFieldToText.  You should run it with the -noPtsCount -noElementsCount -oneBasedIndexing arguments in order to convert the *.ts.fld files into map3d files.  For example:

% TriSurfFieldToText utahtorso-skin.ts.fld utahtorso-skin.pts utahtorso-skin.fac \
-noPtsCount -noElementsCount -oneBasedIndexing

Cheers,
Dave


On Jan 14, 2006, at 7:28 AM, Arda Kurt wrote:

Hello,
 
For my M. Sc. Thesis (Effect of Torso Inhomogeneities to the Body Surface Potential Distribution), I need a low-resolution text-based torso geometry data - including heart, lungs, muscle, skin mesh points and connectivities etc. - for running in map3d? SCI Web site has one dataset (utahtorso-lowres), however, the files are binary. The text version is also high-resolution that it takes days to run!!! I think SCIRun has some modules to convert a binary geometry data into text-based data.
 
Thanks for help.
 
Arda Kurt


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