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[SCIRUN-USERS] Biomesh3D resulting mesh shifted

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  • From: Hon Fai Choi <>
  • To:
  • Subject: [SCIRUN-USERS] Biomesh3D resulting mesh shifted
  • Date: Thu, 29 May 2014 10:55:17 +0200

Hi all,

I have a question regarding Biomesh3D. I use Seg3D to create the
segmentations and save them as .nrrd files as input to Biomesh3D. When
I export the resulting mesh with SciRun as a .vtk file and compare it
with the original image, then the mesh is not in the right location.
It's somehow shifted relative to where it should be. Has anyone
encountered the same problem and knows how to fix this?

Hon Fai

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