This should work, you might want to increase the number of
optimization iterations, say 500 or 800 ... it should be fast ...
regards
Shireen
On 01/14/2015 05:27 PM, kmill2803 . wrote:
So I should use the .lpts files in the
correspondence.xml file? Right now I haven't specified anything.
attached is my correcpondence.xml file
On Wed, Jan 14, 2015 at 5:19 PM,
Shireen Elhabian <shireen@sci.utah.edu> wrote:
the binary shape and the distance transform are having
different centers ...
I assume that these points are output of shapeworks from
previous run, right? if so, use the lpts in your param
file not the wpts ...
Shireen
On 01/14/2015 05:03 PM, kmill2803 . wrote:
did I send the proper pts file?
On Wed, Jan 14, 2015 at
5:02 PM, kmill2803 . <kmilligan28@gmail.com>
wrote:
On Wed, Jan 14,
2015 at 4:54 PM, Shireen Elhabian <shireen@sci.utah.edu>
wrote:
What are those points? would you
mind sharing a sample DT with
its pts just to have an idea ...
thanks
Shireen
On 01/14/2015 04:52 PM,
kmill2803 . wrote:
Thanks,
I dont have paraview
to be able to visualize
isosurface and
corresponding points but
I am working on getting
access to be able
install it on the
computer i am working
on.
I was wondering why
it works for 256
correspondence points.
Isnt the points
provided for
initialization the
same for 256 as 2048?
Also if this is the
case how do I change
the initialization
poiints.
Thanks
again
Kenneth
Milligan
On
Wed, Jan 14, 2015 at
4:37 PM, Shireen
Elhabian <shireen@sci.utah.edu>
wrote:
Hi Kenneth,
This usually happens
if the points you are
providing for
initialization
doesn't lie on the
isosurface of the
respective distance
transforms, as
a visual QC, you might
want to load a sample
nrrd file in paraview
then
load its corresponding
points and make sure
that the points lie on
the
isosurface ...
hope this would help
regards
Shireen
On 01/14/2015
04:31 PM,
kmill2803 . wrote:
> I have got
the shapeworks
software to run
with a set of
proximal
> femurs with
256 correspondence
points. I used the
TorusExample files
> as a
template.
>
> However when
i bump up the
correspondence
points to 512 or
1024 or
> 2048 I get an
itk::Error
PowerOfTwoPointTree
Point is not
contained
> within tree
domain.
>
> Attached is
the
correspondence.xml
file. I only
changed the number
of
> points in
this file.
>
>
> Thanks,
> Kenneth
Milligan
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